SNP Profiles of LCT EEN 302   View Data

 Show/Hide Profiles

 Key

 1234567891011121314
_Input profile
ACCCGGAAAAGGAGCCAAGGAAAAAGAC
1._RUQ_687
______GG_______
2._RUQ_687
_____CC_GG__GG___
3._RUQ_687
_____CC____GG___
 1516171819202122232425262728
_Input profile
AAAAGGGGAAAGAGAGCCGGCCAAAAAA
1._RUQ_687
_GG______AA_CC___
2._RUQ_687
_GG_CT___CCAATTCCGGGGTT
3._RUQ_687
_______CCAA_GG__TT
 2930313233343536373839404142
_Input profile
AGTTAGACCGAGGGGGCGCCTTATAGAG
1._RUQ_687
_____GG______GG_
2._RUQ_687
__AACC-GG_CC____GGGG
3._RUQ_687
__AACCCCGG_______GG
 4344454647484950515253545556
_Input profile
AAAGGGAGGGATGGAAACACAGACAGCC
1._RUQ_687
_________CC___GG
2._RUQ_687
TT_____-__CC_GG_GG
3._RUQ_687
TTCC____GG______GG
 5758596061626364656667686970
_Input profile
ACGGGGAAAAAGACAGAAAAACAACCCG
1._RUQ_687
CC_CC___GGAA____CCCC
2._RUQ_687
CC_CCTT__GGAACC__TTCC_
3._RUQ_687
CC_CC______GT____
 717273747576777879808182  
_Input profile
AGCCAGGGGGACAGCGGGAAAAAAX_XX_X
1._RUQ_687
_CC__GG______AAX_XX_X
2._RUQ_687
_CCTT_-CC_____AAX_XX_X
3._RUQ_687
GGGGTT_______CT_X_XX_X

Input profile: LCT_EEN_302 LCT_EEN_302_Fld#_169_Plt#_1

 
USDA-TARS, United States of America
Location: Field: 169, Tree: 1
 Mars, 2018

1._LCT_EEN_302 RUQ_687

50 %
17 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

2._LCT_EEN_302 RUQ_687

25 %
34 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

3._LCT_EEN_302 RUQ_687

20.5 %
22 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

 


  Key to SNP Markers

1Tcm001s00947643 2Tcm003s01336581 3Tcm003s07402719 4Tcm006s26664133 5TcSNP1034
6TcSNP1060 7TcSNP1062 8TcSNP1063 9TcSNP1075 10TcSNP1096
11TcSNP1111 12TcSNP1149 13TcSNP1156 14TcSNP1175 15TcSNP122
16TcSNP1253 17TcSNP1270 18TcSNP1309 19TcSNP1350 20TcSNP1383
21TcSNP1414 22TcSNP1439 23TcSNP144 24TcSNP1442 25TcSNP1458
26TcSNP1484 27TcSNP150 28TcSNP151 29TcSNP1520 30TcSNP154
31TcSNP174 32TcSNP193 33TcSNP226 34TcSNP230 35TcSNP240
36TcSNP242 37TcSNP25 38TcSNP28 39TcSNP316 40TcSNP32
41TcSNP329 42TcSNP364 43TcSNP372 44TcSNP413 45TcSNP418
46TcSNP42 47TcSNP429 48TcSNP430 49TcSNP448 50TcSNP497
51TcSNP521 52TcSNP529 53TcSNP547 54TcSNP560 55TcSNP561
56TcSNP577 57TcSNP591 58TcSNP60 59TcSNP602 60TcSNP619
61TcSNP653 62TcSNP689 63TcSNP723 64TcSNP731 65TcSNP75
66TcSNP751 67TcSNP776 68TcSNP799 69TcSNP823 70TcSNP836
71TcSNP860 72TcSNP872 73TcSNP891 74TcSNP894 75TcSNP899
76TcSNP90 77TcSNP917 78TcSNP929 79TcSNP944 80TcSNP953
81TcSNP994 82TcSNP998